Genomic variants in cotton

•   All_Cotton_Resequencing_SNPs.txt

    All_Cotton_Resequencing_InDels.txt

  Iso-Seq data

  Gb.Iso-Seq.all.longest.collapsed.fq

•   Gb.Iso-Seq.mapping.gff

  Cotton 3D genome heatmap datasets

•   Cotton_3Dgenome_HeatmapDatasets.tar.gz







  ZY_InDels data

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•   ZY_InDels.txt.gz




  Genome-wide association mapping for agronomic traits in 8-way Upland cotton MAGIC population by SLAF-seq

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•   convertsnp.vcf.gz  




  The phenotyoe data of G.hirsutum for GWAS in The Plant Journal

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•   The_phenotyoe_data_of_G.hirsutum_for_GWAS_in_The_Plant_Journal







  Reference genome sequences of TM-1 and 3-79

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•   Ghirsutum_genome_HAU_v1.0.tar.gz

•   Ghirsutum_genome_HAU_v1.1.tar.gz

•   Gbarbadense_genome_HAU_v2.0.tar.gz







   Reference three genome sequences of G. rotundifolium (K2), G. arboreum (A2) and G. raimondii (D5)

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•   Grotundifolium_genome_HAU_v1.0.tar.gz

•   Garboreum_genome_HAU_v1.0.tar.gz

•   Graimondii_genome_HAU_v1.0.tar.gz







  Nonreference genome sequences of G. hirsutum and G. barbadense

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•   Ghir_nonreference_HAU_V1.0.tar.gz

    Gbar_nonreference_HAU_V1.0.tar.gz







  Reference genome sequence of G. tomentosum

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•   Gossypium_tomentosum.tar.gz







  Cotton Pan-genomes dataset

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•   Cotton_Pan-genomes.tar.gz  







  The chromosome-scale reference genome of black pepper (Piper nigrum)

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•  Piper_nigrum_genome.tar.gz

  Reference genome sequence of Gossypium mustelinum

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•  Gossypium_mustelinum.zip