王茂军

王茂军，教授，博士生导师，作物遗传改良国家重点实验和洪山实验室PI，国家自然科学基金“优青”项目获得者，国家重点研发计划青年科学家项目首席，湖北省青年联合会委员。2007-2011年就读于华中农业大学植物科学与技术专业，获学士学位；2011-2017年就读于华中农业大学作物遗传育种专业，获博士学位；2018-2019年在美国农业部南方研究中心进行访学研究；2019年受聘为华中农业大学教授。

立足于棉花纤维品质改良，运用大数据思维解析棉花纤维发育和品质形成的调控机制，剖析多倍体作物染色质高级结构演化的调控机制。近年来，组装陆地棉和海岛棉的参考基因组和泛基因组，解析了二者纤维品质差异的基因组基础；发现亚基因组不对称驯化贡献优质纤维形成，揭开了基因组三维结构演化的基本规律；剖析纤维发育中的表观修饰和染色质互作动态，解析了纤维品质形成的多维度调控网络。部分研究论文入选“2017年中国农业科学重大进展”、“2019年中国百篇最具影响国际学术论文”。研究结果以第一或通讯作者发表在Nature Genetics (2篇)、Nature Plants、Genome Biology (2篇)、Molecular Biology and Evolution、Nucleic Acids Research和New Phytologist等国际知名杂志，详情参考：https://www.researchgate.net/profile/Maojun_Wang

课题组以干实验和湿实验手段，运用基因组学、生物信息学、分子生物学、基因组编辑和人工智能等多学科手段回答多倍体作物中的基础科学问题。热诚欢迎有志从事大数据研究的学生报考本实验室的硕士、博士生。同时，本实验室招聘博士后若干名，有意者请将个人简历发送至本人邮箱。

1.国家重点研发计划，青年科学家项目，多倍体作物转录调控网络演化与性状形成，2021YFF1000900，2021–2026年，主持

2. 国家自然科学基金，面上项目，棉花泛三维基因组图谱构建和转录调控进化研究，32170645，2022–2025年，主持

3. 国家自然科学基金，优秀青年科学基金，棉花基因组学与纤维品质改良，31922069，2020–2022年，主持

4. 国家自然科学基金，青年科学基金，棉花纤维发育过程中动态三维基因组图谱的构建和转录调控分析， 31801405，2019–2021年，主持

5. 国家科技重大专项子课题，2019ZX08010003-001-014，2019–2020年，主持

6. 华中农业大学高层次人才引进科研启动项目，2019–2024年，主持

7. 湖北省青年科技晨光计划，2018年，主持

8. 中国科协青年人才托举工程，2017–2020年，主持

9. 博士后创新人才支持计划，2017–2019年，主持

1.第十二届大北农科技奖一等奖（序6/10），2022年

2.神农中华农业科技奖优秀创新团队奖（序5/12），2021年

3.中国作物学会科学技术成就奖（青年奖），2021年

4.中国农学会青年科技奖，2021年

5.湖北省青联第十三届委员会委员，2021年

6.湖北省博士后卓越人才跟踪培养计划，2021年

7.湖北省 “挑战杯”大学生课外学术作品竞赛一等奖（指导老师），2021年

8.华中农业大学植物科学技术学院优秀共产党员，2021年

9.湖北省自然科学一等奖（序2/5），2020年

10.全国作物学科青年学者论坛特等奖，2019年

11.中国作物学会优秀博士论文奖，2018年

12.湖北省第三届“长江学子”创新奖，2017年

13.华中农业大学第二届十大创新创业之星，2017年

14.华中农业大学第七届学术希望之星，2016年

15.硕、博士研究生国家奖学金，2013、2015、2016年

一作和通讯文章 (共同第一作者，*通讯作者)：

1. Liuling Pei#, Xianhui Huang#, Zhenping Liu, Xuehan Tian, Jiaqi You, Jianying Li, David D. Fang, Keith Lindsey, Longfu Zhu, Xianlong Zhang, Maojun Wang*. Dynamic 3D genome architecture of cotton fiber reveals subgenome-coordinated chromatin topology for 4-staged single-cell differentiation. Genome Biology, 2022, 23, 45.

2. Maojun Wang#, Zhengyang Qi#, Gregory N. Thyssen, Marina Naoumkina, Johnie N. Jenkins, Jack C. McCarty, Yingjie Xiao, Jianying Li, Xianlong Zhang, David D. Fang. Genomic interrogation of a MAGIC population highlights genetic factors controlling fiber quality traits in cotton. Communications Biology, 2022, 5(1):60.

3. Pengpeng Wang#, Na Dong#, Maojun Wang#, Gaofei Sun, Yinhua Jia, Xiaoli Geng, Min Liu6, Weipeng Wang, Zhaoe Pan, Qiuyue Yang, Hongge Li, Chunyan Wei, Liru Wang, Hongkun Zheng, Shoupu He*, Xianlong Zhang*, Qinglian Wang*, Xiongming Du*. Introgression from Gossypium hirsutum is a driver for population divergence and genetic diversity in Gossypium barbadense. The Plant Journal, 2022, https://doi.org/10.1111/tpj.15702.

4. Jianying Li, Daojun Yuan, Pengcheng Wang, Qiongqiong Wang, Mengling Sun, Zhenping Liu, Huan Si, Zhongping Xu, Yizan Ma, Boyang Zhang, Liuling Pei, Lili Tu, Longfu Zhu, Ling-Ling Chen, Keith Lindsey, Xianlong Zhang, Shuangxia Jin*, Maojun Wang*. Cotton pan-genome retrieves the lost sequences and genes during domestication and selection. Genome Biology, 2021, 22, 119.

5. Maojun Wang#, Jianying Li#, Pengcheng Wang, Fang Liu, Zhenping Liu, Guannan Zhao, Zhongping Xu, Liuling Pei, Corrinne E. Grover, Jonathan F. Wendel*, Kunbo Wang*, Xianlong Zhang*. Comparative genome analyses highlight transposon-mediated genome expansion and the evolutionary architecture of 3D genomic folding in cotton. Molecular Biology and Evolution, 2021, 38(9):3621–3636.

6. Liuling Pei, Guoliang Li, Keith Lindsey, Xianlong Zhang, Maojun Wang*. Plant 3D genomics: the exploration and application of chromatin organization. New Phytologist, 2021, 230(5):1772–1786.

7. Yuexuan Long, Zhenping Liu, Pengcheng Wang, Hang Yang, Yuejin Wang, Sainan Zhang, Xianlong Zhang, Maojun Wang*. Disruption of topologically associating domains by structural variations in tetraploid cottons. Genomics, 2021, 113(5):3405-3414.

8. Zhonghua Li#, Pengcheng Wang#, Chunyuan You, Jiwen Yu, Xiangnan Zhang  Feilin Yan, Zhengxiu Ye, Chao Shen, Baoqi Li, Kai Guo, Nian Liu, Gregory N. Thyssen, David D. Fang, Keith Lindsey, Xianlong Zhang, Maojun Wang*, Lili Tu*. Combined GWAS and eQTL analysis uncovers a genetic regulatory network orchestrating the initiation of secondary cell wall development in cotton. New Phytologist, 2020, 226(6):1738–1752.

9. Maojun Wang#, Lili Tu#, Daojun Yuan#, De Zhu, Chao Shen, Jianying Li, Fuyan Liu, Liuling Pei, Pengcheng Wang, Guannan Zhao, Zhengxiu Ye, Hui Huang, Feilin Yan, Yizan Ma, Lin Zhang, Min Liu, Jiaqi You, Yicheng Yang, Zhenping Liu, Fan Huang, Baoqi Li, Ping Qiu, Qinghua Zhang, Longfu Zhu, Shuangxia Jin, Xiyan Yang, Ling Min, Guoliang Li, Ling-Ling Chen, Hongkun Zheng, Keith Lindsey*, Zhongxu Lin*, Joshua A. Udall* and Xianlong Zhang*. Reference genome sequences of two cultivated allotetraploid cottons, Gossypium hirsutum and Gossypium barbadense. Nature Genetics, 2019, 51(2):224–229.

10. Liuling Pei, Lin Zhang, Jianying Li, Chao Shen, Ping Qiu, Lili Tu, Xianlong Zhang and Maojun Wang*. Tracing the origin and evolution history of methylation-related genes in plants. BMC Plant Biology, 2019, 19(1):307.

11. Maojun Wang, Pengcheng Wang, Min Lin*, Zhengxiu Ye, Guoliang Li, Lili Tu, Chao Shen, Jianying Li, Qingyong Yang*, and Xianlong Zhang*. Evolutionary dynamics of 3D genome architecture following polyploidization in cotton. Nature Plants, 2018, 4(2):90–97.

12. Maojun Wang#, Pengcheng Wang#, Fan Liang, Zhengxiu Ye, Jianying Li, Chao Shen, Liuling Pei, Feng Wang, Jiang Hu, Lili Tu, Daohua He*, Xianlong Zhang*. A global survey of alternative splicing in allopolyploid cotton: landscape, complexity and regulation. New Phytologist, 2018, 217(1):163–178.

13. Maojun Wang, Lili Tu, Min Lin, Zhongxu Lin, Pengcheng Wang, Qingyong Yang, Zhengxiu Ye, Chao Shen, Jianying Li, Lin Zhang, Xiaolin Zhou, Xinhui Nie, Zhonghua Li, Kai Guo, Yizan Ma, Cong Huang, Shuangxia Jin, Longfu Zhu, Xiyan Yang, Ling Min, Daojun Yuan, Qinghua Zhang, Keith Lindsey*, Xianlong Zhang*. Asymmetric subgenome selection and cis-regulatory divergence during cotton domestication. Nature Genetics, 2017, 49, 579–587.

14. Maojun Wang, Pengcheng Wang, Lili Tu, Sitao Zhu, Lin Zhang, Zhonghua Li, Qinghua Zhang, Daojun Yuan, Xianlong Zhang*. Multi-omics maps of cotton fibre reveal epigenetic basis for staged single-cell differentiation. Nucleic Acids Research, 2016, 44, 4067–4079.

15. Maojun Wang, Daojun Yuan, Lili Tu, Wenhui Gao, Yonghui He, Haiyan Hu, Pengcheng Wang, Nian Liu, Keith Lindsey, Xianlong Zhang*. Long noncoding RNAs and their proposed functions in fibre development of cotton (Gossypium spp.). New Phytologist, 2015, 207, 1181–1197.

16. Daojun Yuan#, Zhonghui Tang#, Maojun Wang#, Wenhui Gao, Lili Tu, Xin Jin, Lingling Chen, Yonghui He, Lin Zhang, Longfu Zhu, Yang Li, Qiqi Liang, Zhongxu Lin, Xiyan Yang, Nian Liu, Shuangxia Jin, Yang Lei, Yuanhao Ding, Guoliang Li, Xiaoan Ruan, Yijun Ruan*, Xianlong Zhang*. The genome sequence of Sea-Island cotton (Gossypium barbadense) provides insights into the allopolyploidization and development of superior spinnable fibres. Scientific Reports, 2015, 5, 17662.

17. Maojun Wang, Daojun Yuan*, Wenhui Gao, Yang Li, Jiafu Tan, Xianlong Zhang*. A comparative genome analysis of PME and PMEI families reveals the evolution of pectin metabolism in plant cell walls. PLoS One, 2013, 8, e72082.

参与作者文章（部分）：

1. Yizan Ma#, Ling Min#, Junduo Wang#, Yaoyao Li, Yuanlong Wu, Qin Hu, Yuanhao Ding, Maojun Wang, Yajun Liang, Zhaolong Gong, Sai Xie, Xiaojun Su, Chaozhi Wang, Yunlong Zhao, Qidi Fang, Yanlong Li, Huabin Chi, Miao Chen, Aamir Hamid Khan, Keith Lindsey, Longfu Zhu, Xueyuan Li*, and Xianlong Zhang*. A combination of genome-wide and transcriptome-wide association studies reveals genetic elements leading to male sterility during high temperature stress in cotton. New Phytologist, 2021, 231(1):165–181.

2. Baoqi Li, Lin Chen, Weinan Sun, Di Wu, Maojun Wang, Yu Yu, Guoxing Chen, Wanneng Yang, Zhongxu Lin, Xianlong Zhang, Lingfeng Duan*, Xiyan Yang*. Phenomics-based GWAS analysis reveals the genetic architecture for drought resistance in cotton. Plant Biotechnology Journal, 2020, 18(12):2533-2544.

3. Lisong Hu#, Zhongping Xu#, Maojun Wang, Rui Fan, Daojun Yuan, Baoduo Wu, Wen Li, Christopher A Saski, Henry Daniell, Jonathan F. Wendel, Keith Lindsey, Xianlong Zhang, Chaoyun Hao*, Shuangxia Jin*. The chromosome-scale reference genome of black pepper provides insight into piperine biosynthesis. Nature Communications 2019, 16, 10(1):4702.

4. Jianying Li, J. Joe Hull, Sijia Liang, Qiongqiong Wang, Luo Chen, Qinghua Zhang, Maojun Wang, Shahid Mansoor, Xianlong Zhang and Shuangxia Jin*. Genome-Wide Analysis of Cotton miRNAs During Whitefly Infestation Offers New Insights into Plant-Herbivore Interaction. International Journal of Molecular Sciences 2019, 28, 20(21).

5. Chao Shen, Nian Wang, Cong Huang, Maojun Wang, Xianlong Zhang, Zhongxu Lin. Population genomics reveals a fine‐scale recombination landscape for genetic improvement of cotton. Plant Journal, 2019, 99(3):494–505.

6. Jianying Li, Maojun Wang, Yajun Li, Qinghua Zhang, Keith Lindsey, Henry Daniell, Shuangxia Jin, Xianlong Zhang. Multi-omics analyses reveal epigenomics basis for cotton somatic embryogenesis through successive regeneration acclimation process. Plant Biotechnology Journal, 2019, 17(2):435–450.

7. Yizan Ma, Ling Min*, Maojun Wang, Chaozhi Wang, Yunlong Zhao, Yaoyao Li, Qidi Fang, Yuanlong Wu, Sai Xie, Yuanhao Ding, Xiaojun Su, Qin Hu, Qinghua Zhang, Xueyuan Li, and Xianlong Zhang*. Disrupted genome methylation in response to high temperature has distinct affects on microspore abortion and anther indehiscence. Plant Cell, 2018, 30(7):1387–1403.

8. Lin Zhang, Maojun Wang, Nannan Li, Honglei Wang, Ping Qiu, Liuling Pei, Zheng Xu, Tianyi Wang, Erlin Gao, Junxia Liu, Shiming Liu, Qin Hu, Yuhuan Miao, Keith Lindsey, Lili Tu, Longfu Zhu and Xianlong Zhang. Long non-coding RNAs involved in resistance to Verticillium dahliae, a fungal disease in cotton. Plant Biotechnology Journal, 2018, 16(6):1172–1185.

9. Haiyan Hu, Maojun Wang, Yuanhao Ding, Sitao Zhu, Guannan Zhao, Lili Tu, Xianlong Zhang. Transcriptomic repertoires depict the initiation of lint and fuzz fibers in cotton (Gossypium hirsutum L.). Plant Biotechnology Journal, 2018, 16(5):1002–1012.

10. Kai Guo, Lili Tu, Yonghui He, Jinwu Deng, Maojun Wang, Hui Huang, Zhonghua Li, and Xianlong Zhang. Interaction between calcium and potassium modulates elongation rate in cotton fiber cells. Journal of Experimental Botany, 2017, 68(18):5161–5175.

11. Kai Guo, Xueqiong Du, Lili Tu, Wenxin Tang, Pengcheng Wang, Maojun Wang, Zhen Liu, Xianlong Zhang. Fibre elongation requires normal redox homeostasis modulated by cytosolic ascorbate peroxidase in cotton (Gossypium hirsutum). Journal of Experimental Botany, 2016, 67, 3289–3301.

1. 参编Genome Sequencing, In: Cotton, 2^nd edition. 2015, edited by David D. Fang and Richard G. Percy. American Society of Agronomy, Crop Scie     nce Society of America, and Soil Science of America. p. 289-30